Show simple item record

dc.contributor.authorStrapagiel, Dominik
dc.contributor.authorMarciniak, Błażej
dc.contributor.authorBorówka, Paulina
dc.contributor.authorBakuła, Zofia
dc.contributor.authorvan Ingen, Jakko
dc.contributor.authorSafianowska, Aleksandra
dc.contributor.authorBrzostek, Anna
dc.contributor.authorDziadek, Jarosław
dc.contributor.authorJagielski, Tomasz
dc.date.accessioned2021-12-17T09:20:43Z
dc.date.available2021-12-17T09:20:43Z
dc.date.issued2016
dc.identifier.citationStrapagiel D, Borówka P, Marciniak B, Bakuła Z, van Ingen J, Safianowska A, Brzostek A, Dziadek J, Jagielski T. 2016. Draft genome sequences of Mycobacterium kansasii strains 1010001454, 1010001458, 1010001468, 1010001493, 1010001495, and 1010001469, isolated from environmental sources. Genome Announc 4(3):e00456-16 doi: 10.1128/genomeA.00456-16.pl_PL
dc.identifier.urihttp://hdl.handle.net/11089/40078
dc.description.abstractMycobacterium kansasii belongs to the nontuberculous mycobacteria (NTM) and causes opportunistic infections with both pulmonary and extrapulmonary manifestations. Here, we report the draft genome sequences of six environmental M. kansasii strains, designated 1010001495 (type I), 1010001469 (type II), 1010001468 (type III), 1010001458 (type IV), 1010001454 (type V), and 1010001493 (type V), originally isolated in five different European countries.pl_PL
dc.description.sponsorshipThe study was financed by the National Centre for Research and Development: “LIDER” Program (contract no. LIDER/044/457/L-4/12/NCBR/2013).pl_PL
dc.language.isoenpl_PL
dc.publisherAmerican Society for Microbiologypl_PL
dc.relation.ispartofseriesGenome Announcements;4
dc.rightsUznanie autorstwa 4.0 Międzynarodowe*
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/*
dc.subjectMycobacterium kansasiipl_PL
dc.subjectgenomepl_PL
dc.titleDraft Genome Sequences of Mycobacterium kansasii Strains 1010001454, 1010001458, 1010001468, 1010001493, 1010001495, and 1010001469, Isolated from Environmental Sourcespl_PL
dc.typeArticlepl_PL
dc.page.number2pl_PL
dc.contributor.authorAffiliationBiobank Lab, Department of Molecular Biophysics, University of Łódź, Łódź, Polandpl_PL
dc.contributor.authorAffiliationBiobank Lab, Department of Molecular Biophysics, University of Łódź, Łódź, Polandpl_PL
dc.contributor.authorAffiliationDepartment of Anthropology, University of Łódź, Łódź, Polandpl_PL
dc.contributor.authorAffiliationDepartment of Applied Microbiology, Institute of Microbiology, Faculty of Biology, University of Warsaw, Warsaw, Polandpl_PL
dc.contributor.authorAffiliationDepartment of Medical Microbiology, Radboud University Medical Center, Nijmegen, The Netherlandspl_PL
dc.contributor.authorAffiliationDepartment of Internal Medicine, Pulmonology and Allergology, Warsaw Medical University, Warsaw, Polandpl_PL
dc.contributor.authorAffiliationMycobacterium Genetics and Physiology Unit, Institute of Medical Biology, Polish Academy of Sciences, Łódź, Polandpl_PL
dc.contributor.authorAffiliationMycobacterium Genetics and Physiology Unit, Institute of Medical Biology, Polish Academy of Sciences, Łódź, Polandpl_PL
dc.contributor.authorAffiliationDepartment of Applied Microbiology, Institute of Microbiology, Faculty of Biology, University of Warsaw, Warsaw, Polandpl_PL
dc.identifier.eissn2169-8287
dc.referencesGriffith DE, Aksamit T, Brown-Elliott BA, Catanzaro A, Daley C, Gordin F, Holland SM, Horsburgh R, Huitt G, Iademarco MF, Iseman M, Olivier K, Ruoss S, von Reyn CF, Wallace RJ, Jr, Winthrop K, ATS Mycobacterial Diseases Subcommittee, American Thoracic Society, Infectious Disease Society of America. 2007. An official ATS/IDSA statement: diagnosis, treatment, and prevention of nontuberculous mycobacterial diseases. Am J Respir Crit Care Med 175: 367–416.pl_PL
dc.referencesHoefsloot W, van Ingen J, Andrejak C, Angeby K, Bauriaud R, Bemer P, Beylis N, Boeree MJ, Cacho J, Chihota V, Chimara E, Churchyard G, Cias R, Daza R, Daley CL, Dekhuijzen PN, Domingo D, Drobniewski F, Esteban J, Fauville-Dufaux M, Folkvardsen DB, Gibbons N, Gómez- Mampaso E, Gonzalez R, Hoffmann H, Hsueh PR, Indra A, Jagielski T, Jamieson F, Jankovic M, Jong E, Keane J, Koh WJ, Lange B, Leao S, Macedo R, Mannsåker T, Marras TK, Maugein J, Milburn HJ, Mlinkó T, Morcillo N, Morimoto K, Papaventsis D, Palenque E, Paez-Peña M, Piersimoni C, Polanová M, Rastogi N, Richter E, et al. 2013. The geographic diversity of nontuberculous mycobacteria isolated from pulmonary samples: an NTM-NET collaborative study. Eur Respir J 42: 1604–1613. http://dx.doi.org/10.1183/09031936.00149212.pl_PL
dc.referencesBakuła Z, Safianowska A, Nowacka-Mazurek M, Bielecki J, Jagielski T. 2013. Short communication: subtyping of Mycobacterium kansasii by PCRrestriction enzyme analysis of the hsp65 gene. Bio Med Res Int 2013:178725. http://dx.doi.org/10.1155/2013/178725.pl_PL
dc.referencesBakuła Z, Modrzejewska M, Safianowska A, van Ingen J, Proboszcz M, Bielecki J, Jagielski T. 2016. Proposal of a new method for subtyping of Mycobacterium kansasii based upon PCR restriction enzyme analysis of the tuf gene. Diagn Microbiol Infect Dis 84:318 –321. http://dx.doi.org/ 10.1016/j.diagmicrobio.2015.12.009.pl_PL
dc.referencesTaillard C, Greub G, Weber R, Pfyffer GE, Bodmer T, Zimmerli S, Frei R, Bassetti S, Rohner P, Piffaretti JC, Bernasconi E, Bille J, Telenti A, Prod’hom G. 2003. Clinical implications of Mycobacterium kansasii species heterogeneity: Swiss National Survey. J Clin Microbiol 41:1240 –1244. http://dx.doi.org/10.1128/JCM.41.3.1240-1244.2003.pl_PL
dc.referencesVan Embden JDA, Cave MD, Crawford JT, Dale JW, Eisenach KD, Gicquel B, Hermans P, Martin C, McAdam R, Shinnick TM. 1993. Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology. J Clin Microbiol 31: 406–409.pl_PL
dc.referencesNurk S, Bankevich A, Antipov D, Gurevich A, Korobeynikov A, Lapidus A, Prjibelsky A, Pyshkin A, Sirotkin A, Sirotkin Y, Stepanauskas R, McLean J, Lasken R, Clingenpeel SR, Woyke T, Tesler G, Alekseyev MA, Pevzner PA. 2013. Assembling genomes and mini-metagenomes from highly chimeric reads, p 158–170. In Deng M, Jiang R, Sun F, Zhang X (ed), Research in computational molecular biology. Springer Verlag, Heidelberg, Germany.pl_PL
dc.referencesMarciniak B, Strapagiel D. 2016. Fa_TOOL—simple command line tool for fasta file editing. https://github.com/BiobankLab/FA_TOOL.pl_PL
dc.contributor.authorEmailt.jagielski@biol.uw.edu.pl.pl_PL
dc.identifier.doi10.1128/genomeA.00456-16
dc.relation.volume3pl_PL
dc.disciplinenauki biologicznepl_PL


Files in this item

Thumbnail
Thumbnail

This item appears in the following Collection(s)

Show simple item record

Uznanie autorstwa 4.0 Międzynarodowe
Except where otherwise noted, this item's license is described as Uznanie autorstwa 4.0 Międzynarodowe